Showing : software error • reset
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5
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2.6k
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rtracklayer::import() BigWig issue on windows (solved)
software error BigWig import windows
5.7 years ago • updated 5.6 years ago lsilva.m • 0
0
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1
reply
1.3k
views
My problem in MAGeCKFlute
software error
5.7 years ago 1092787384 • 0
0
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2
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4.0k
views
Problem installing and loading the package SingleCellExperiment
software error
updated 5.7 years ago by ★ 29k • written 5.7 years ago by • 0
2
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3
replies
752
views
Error in getBM
software error
5.7 years ago gerassimov ▴ 10
1
vote
2
replies
763
views
Diffbind- results different every time I run it
software error DiffBind
updated 5.7 years ago by ★ 5.2k • written 5.7 years ago by • 0
1
vote
12
replies
2.2k
views
negative one "-1" values in index files using Rsubread
software error rsubread
updated 5.7 years ago by ▴ 450 • written 5.7 years ago by • 0
1
vote
1
reply
1.4k
views
Trouble using affy library
software error R microarray affy
updated 5.7 years ago by 68k • written 5.7 years ago by • 0
0
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3
replies
2.1k
views
DESeq2 - cannot find function?
deseq2 r software error
updated 5.7 years ago by 43k • written 5.7 years ago by • 0
0
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0
replies
485
views
Error in (function (classes, fdef, mtable) in SCnorm
software error
5.7 years ago yueli7 ▴ 20
1
vote
4
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3.2k
views
Problem installing annotation packages AnnotationDbi & BiocFileCache
software error annotation
written 5.7 years ago by • 0
0
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0
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1.3k
views
No methods found in package Biobase for request: read.AnnotatedDataFrame
software error biobase Iranges ArrayExpressHTS
5.7 years ago Ed Siefker ▴ 230
2
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7
replies
1.2k
views
Cannot install the FlowWorkSpaceData package
software error
updated 5.7 years ago by 25k • written 5.7 years ago by ▴ 10
3
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3
replies
2.0k
views
Repeated error loading DESqe2 - package xxx not found
deseq2 package software error
updated 5.7 years ago by 25k • written 5.7 years ago by • 0
0
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4
replies
3.5k
views
Compilation error when attempting to install GenomicRanges from BiocManager.
software error GenomicRanges
5.7 years ago atheeth14 • 0
0
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8
replies
1.8k
views
Failed to read SDRF
software error arrayexpressHTS
5.7 years ago Ed Siefker ▴ 230
0
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1
reply
841
views
Error in Medips MEDIPS.CpGenrich()
software error Grange RangedData
5.7 years ago mawusse.agbessi • 0
2
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4
replies
1.8k
views
Weird error in Rstudio trying to retreive and load genomic data from external databases
R software error Bioconductor
5.7 years ago svlachavas ▴ 840
0
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2
replies
1.6k
views
Problems while installing HTSeqGenie and gmapR
software error HTSeq installation
updated 5.7 years ago by 25k • written 5.7 years ago by • 0
0
votes
1
reply
873
views
Problem starting msmsworkflow (RMassBank)
software error RMassBank
updated 5.8 years ago by 4.2k • written 5.8 years ago by • 0
0
votes
1
reply
921
views
Unable to install groupGO in RStudio
software error
5.8 years ago mzwanelen ▴ 10
1
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6
replies
3.4k
views
ChIPQC error: 'names' attribute [9] must be the same length as the vector [7]
software error
updated 5.8 years ago by • 0 • written 6.4 years ago by • 0
0
votes
0
replies
795
views
Loading 1000 g data: Error in `.rowNamesDF<-`(x, value = value): duplicate 'row.names' are not allowed
software error
5.8 years ago lxiao63 • 0
1
vote
1
reply
615
views
Unable to load fabbia using R 3.6.2:Cannoy launch library(RcmdrPlugin.BiclustGUI)
software error
updated 5.8 years ago by 25k • written 5.8 years ago by ▴ 10
0
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1
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1.1k
views
biomaRt package not working in R version3.6
software error
updated 5.8 years ago by 68k • written 5.8 years ago by • 0
0
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1
reply
566
views
The query to the BioMart webservice returned an invalid result: biomaRt expected a character string of length 1.
software error
updated 5.8 years ago by ★ 6.6k • written 5.8 years ago by • 0
0
votes
1
reply
474
views
Error in getBM(attributes)
software error
updated 5.8 years ago by ★ 6.6k • written 5.8 years ago by • 0
2
votes
2
replies
1.9k
views
Rgraphviz installation failing
software error Rgraphviz
updated 5.8 years ago by ★ 6.6k • written 5.8 years ago by • 0
1
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3
replies
18k
views
Update all/some/none? [a/s/n]:
software error
updated 5.8 years ago by 68k • written 5.8 years ago by • 0
1
vote
2
replies
920
views
Species, supported by the clusterProfiler package
software error go
updated 5.8 years ago by 68k • written 5.8 years ago by • 0
1
vote
1
reply
1.8k
views
Error using r msa::msaClustalW in parallel
software error msa
updated 5.8 years ago by ▴ 300 • written 5.8 years ago by ▴ 10
1
vote
2
replies
692
views
Virus found in GeneNetworkBuilder_1.28.1.tar.gz
software error
5.8 years ago Bijoy Joseph • 0
2
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3
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891
views
devtools::check() => How to resolve "missing arguments not allowed in calls to list" for R package development?
software error
updated 5.8 years ago by 25k • written 5.8 years ago by • 0
1
vote
0
replies
575
views
GENESIS: assocTestSingle() is not giving any output; guessing that it is arising from GenotypeBlockIterator()
software error
5.8 years ago alipka ▴ 10
2
votes
2
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1.2k
views
Error in biomaRt::getBM(attributes = c("ensembl_transcript_id", "external_gene_name")
software error biomaRt
updated 5.8 years ago by ★ 6.6k • written 5.8 years ago by • 0
0
votes
1
reply
728
views
NSG Rule - Need IP Address Ranges
software error
updated 5.8 years ago by 25k • written 5.8 years ago by • 0
0
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2
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1.3k
views
makeOrgPackage Error in .deriveTableNameFromField(field = keytype, x) : Two fields in the source DB have the same name
software error go AnnotationForge AnnotationDbi
updated 5.8 years ago by 68k • written 5.8 years ago by • 0
0
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2
replies
12k
views
Unable to install, update WGCNA and GO.db
WGCNA software error
5.8 years ago rproendo ▴ 30
1
vote
3
replies
1.1k
views
how to set strandMode in summarizeOverlaps()?
software error strand-specific
updated 5.8 years ago by ★ 3.4k • written 5.8 years ago by • 0
5
votes
5
replies
1.6k
views
Installation: go to specific version of a package prompted
software error installation
updated 5.9 years ago by 68k • written 5.9 years ago by • 0
0
votes
4
replies
3.5k
views
How to install older version of DESeq2?
deseq2 software error
updated 5.9 years ago by 25k • written 5.9 years ago by • 0
0
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1
reply
763
views
build error in release version FELLA
fella software error
5.9 years ago sergi.picart ▴ 20
0
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0
replies
489
views
Error for getFireHoseData in RTCGAToolbox 2.16.1
software error
5.9 years ago lingeng.lu • 0
0
votes
2
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1.3k
views
keggLink Error: linking "genes" and "reaction"
software error keggLink R
updated 5.9 years ago by 4.2k • written 5.9 years ago by • 0
0
votes
1
reply
833
views
unable to install snpStats
software error
5.9 years ago amirfartash • 0
1
vote
1
reply
569
views
Issues with Somatic Signatures package
software error somatic signatures
updated 5.9 years ago by 25k • written 5.9 years ago by ▴ 10
2
votes
7
replies
2.4k
views
DeSeq2 - Can't fetch any results: Error in .wrap_in_length_one_list_like_object(value, name, x)
deseq2 software error
updated 12 months ago by • 0 • written 5.9 years ago by ▴ 30
0
votes
2
replies
1.4k
views
Can't Load SingleCellExperiment Object
software error SingleCellExperiment
updated 5.9 years ago by ★ 29k • written 5.9 years ago by • 0
0
votes
1
reply
1.1k
views
recount: inconsistency between pheno table structure for gene and transcript datasets
software error recount
updated 5.9 years ago by ★ 1.1k • written 5.9 years ago by • 0
0
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1
reply
1.1k
views
Error: cannot allocate vector of size 878.2 Mb
software error nucleR
updated 5.9 years ago by 68k • written 5.9 years ago by • 0
0
votes
5
replies
2.3k
views
Rbowtie fails to compile using spack with "error: reference to Byte is ambiguous"
rbowtie software error
updated 5.9 years ago by ▴ 350 • written 6.5 years ago by ▴ 120
704 results • Page 3 of 15
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Replies
Answer: Finding duplicated entries in GRangesList by Kevin Blighe ★ 4.0k
The duplicated and unique functions operate element-wise on GRangesList objects. This means that they apply the respective function to each…
Answer: DESeq2 on non-RNASeq counts data by Kevin Blighe ★ 4.0k
The use of DESeq2 for count data from artificial sequences is acceptable, as the program models counts via a negative binomial distribution…
Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k
Hello Rui Tang, The buffer overflow error in featureCounts that you encountered is likely due to a compatibility issue between the Subre…
Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k
The issue that you describe with the tumor mutational burden (TMB) plots appearing linear and lacking consistent TMB values across samples …
Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Kevin Blighe ★ 4.0k
There are alternative explanations for why these samples are so similar. The similarity could result from low biological variability in gen…
Votes
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Identifying differentially expressed genes in individual samples from a large co
Answer: Identifying differentially expressed genes in individual samples from a large co
Bioconductor Seminar Series - Dec 2: Deep-learning Gene Perturbation Effect Prediction
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