Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
software error
•
reset
0
votes
5
replies
2.6k
views
rtracklayer::import() BigWig issue on windows (solved)
software error
BigWig
import
windows
5.7 years ago • updated 5.6 years ago
lsilva.m
• 0
0
votes
1
reply
1.3k
views
My problem in MAGeCKFlute
software error
5.7 years ago
1092787384
• 0
0
votes
2
replies
4.0k
views
Problem installing and loading the package SingleCellExperiment
software error
updated 5.7 years ago by
Aaron Lun
★ 29k • written 5.7 years ago by
NIK
• 0
2
votes
3
replies
752
views
Error in getBM
software error
5.7 years ago
gerassimov
▴ 10
1
vote
2
replies
763
views
Diffbind- results different every time I run it
software error
DiffBind
updated 5.7 years ago by
Rory Stark
★ 5.2k • written 5.7 years ago by
francesca3
• 0
1
vote
12
replies
2.2k
views
negative one "-1" values in index files using Rsubread
software error
rsubread
updated 5.7 years ago by
Yang Liao
▴ 450 • written 5.7 years ago by
peter.r.hoyt
• 0
1
vote
1
reply
1.4k
views
Trouble using affy library
software error
R
microarray
affy
updated 5.7 years ago by
James W. MacDonald
68k • written 5.7 years ago by
adam_casas
• 0
0
votes
3
replies
2.1k
views
DESeq2 - cannot find function?
deseq2
r
software error
updated 5.7 years ago by
Michael Love
43k • written 5.7 years ago by
lindsay
• 0
0
votes
0
replies
485
views
Error in (function (classes, fdef, mtable) in SCnorm
software error
5.7 years ago
yueli7
▴ 20
1
vote
4
replies
3.2k
views
Problem installing annotation packages AnnotationDbi & BiocFileCache
software error
annotation
written 5.7 years ago by
alan.g.hudson
• 0
0
votes
0
replies
1.3k
views
No methods found in package Biobase for request: read.AnnotatedDataFrame
software error
biobase
Iranges
ArrayExpressHTS
5.7 years ago
Ed Siefker
▴ 230
2
votes
7
replies
1.2k
views
Cannot install the FlowWorkSpaceData package
software error
updated 5.7 years ago by
Martin Morgan
25k • written 5.7 years ago by
a.f.girigorie
▴ 10
3
votes
3
replies
2.0k
views
Repeated error loading DESqe2 - package xxx not found
deseq2
package
software error
updated 5.7 years ago by
Martin Morgan
25k • written 5.7 years ago by
DcL-A
• 0
0
votes
4
replies
3.5k
views
Compilation error when attempting to install GenomicRanges from BiocManager.
software error
GenomicRanges
5.7 years ago
atheeth14
• 0
0
votes
8
replies
1.8k
views
Failed to read SDRF
software error
arrayexpressHTS
5.7 years ago
Ed Siefker
▴ 230
0
votes
1
reply
841
views
Error in Medips MEDIPS.CpGenrich()
software error
Grange
RangedData
5.7 years ago
mawusse.agbessi
• 0
2
votes
4
replies
1.8k
views
Weird error in Rstudio trying to retreive and load genomic data from external databases
R
software error
Bioconductor
5.7 years ago
svlachavas
▴ 840
0
votes
2
replies
1.6k
views
Problems while installing HTSeqGenie and gmapR
software error
HTSeq
installation
updated 5.7 years ago by
Martin Morgan
25k • written 5.7 years ago by
eric33150
• 0
0
votes
1
reply
873
views
Problem starting msmsworkflow (RMassBank)
software error
RMassBank
updated 5.8 years ago by
shepherl
4.2k • written 5.8 years ago by
jean.froment
• 0
0
votes
1
reply
921
views
Unable to install groupGO in RStudio
software error
5.8 years ago
mzwanelen
▴ 10
1
vote
6
replies
3.4k
views
ChIPQC error: 'names' attribute [9] must be the same length as the vector [7]
software error
updated 5.8 years ago by
vermasrikant
• 0 • written 6.4 years ago by
sonyuna90
• 0
0
votes
0
replies
795
views
Loading 1000 g data: Error in `.rowNamesDF<-`(x, value = value): duplicate 'row.names' are not allowed
software error
5.8 years ago
lxiao63
• 0
1
vote
1
reply
615
views
Unable to load fabbia using R 3.6.2:Cannoy launch library(RcmdrPlugin.BiclustGUI)
software error
updated 5.8 years ago by
Martin Morgan
25k • written 5.8 years ago by
jlchandon
▴ 10
0
votes
1
reply
1.1k
views
biomaRt package not working in R version3.6
software error
updated 5.8 years ago by
James W. MacDonald
68k • written 5.8 years ago by
Diaz.335
• 0
0
votes
1
reply
566
views
The query to the BioMart webservice returned an invalid result: biomaRt expected a character string of length 1.
software error
updated 5.8 years ago by
Mike Smith
★ 6.6k • written 5.8 years ago by
frank007
• 0
0
votes
1
reply
474
views
Error in getBM(attributes)
software error
updated 5.8 years ago by
Mike Smith
★ 6.6k • written 5.8 years ago by
ross.kedl
• 0
2
votes
2
replies
1.9k
views
Rgraphviz installation failing
software error
Rgraphviz
updated 5.8 years ago by
Mike Smith
★ 6.6k • written 5.8 years ago by
mascaretti
• 0
1
vote
3
replies
18k
views
Update all/some/none? [a/s/n]:
software error
updated 5.8 years ago by
James W. MacDonald
68k • written 5.8 years ago by
ayeshakaramat
• 0
1
vote
2
replies
920
views
Species, supported by the clusterProfiler package
software error
go
updated 5.8 years ago by
James W. MacDonald
68k • written 5.8 years ago by
poisk.kirpitcha
• 0
1
vote
1
reply
1.8k
views
Error using r msa::msaClustalW in parallel
software error
msa
updated 5.8 years ago by
UBod
▴ 300 • written 5.8 years ago by
vladimirbcs
▴ 10
1
vote
2
replies
692
views
Virus found in GeneNetworkBuilder_1.28.1.tar.gz
software error
5.8 years ago
Bijoy Joseph
• 0
2
votes
3
replies
891
views
devtools::check() => How to resolve "missing arguments not allowed in calls to list" for R package development?
software error
updated 5.8 years ago by
Martin Morgan
25k • written 5.8 years ago by
mnabian
• 0
1
vote
0
replies
575
views
GENESIS: assocTestSingle() is not giving any output; guessing that it is arising from GenotypeBlockIterator()
software error
5.8 years ago
alipka
▴ 10
2
votes
2
replies
1.2k
views
Error in biomaRt::getBM(attributes = c("ensembl_transcript_id", "external_gene_name")
software error
biomaRt
updated 5.8 years ago by
Mike Smith
★ 6.6k • written 5.8 years ago by
e.everman
• 0
0
votes
1
reply
728
views
NSG Rule - Need IP Address Ranges
software error
updated 5.8 years ago by
Martin Morgan
25k • written 5.8 years ago by
vkatakwar
• 0
0
votes
2
replies
1.3k
views
makeOrgPackage Error in .deriveTableNameFromField(field = keytype, x) : Two fields in the source DB have the same name
software error
go
AnnotationForge
AnnotationDbi
updated 5.8 years ago by
James W. MacDonald
68k • written 5.8 years ago by
tzaquin
• 0
0
votes
2
replies
12k
views
Unable to install, update WGCNA and GO.db
WGCNA
software error
5.8 years ago
rproendo
▴ 30
1
vote
3
replies
1.1k
views
how to set strandMode in summarizeOverlaps()?
software error
strand-specific
updated 5.8 years ago by
Robert Castelo
★ 3.4k • written 5.8 years ago by
lizd
• 0
5
votes
5
replies
1.6k
views
Installation: go to specific version of a package prompted
software error
installation
updated 5.9 years ago by
James W. MacDonald
68k • written 5.9 years ago by
GENOMIC_region
• 0
0
votes
4
replies
3.5k
views
How to install older version of DESeq2?
deseq2
software error
updated 5.9 years ago by
Martin Morgan
25k • written 5.9 years ago by
joshianu2018
• 0
0
votes
1
reply
763
views
build error in release version FELLA
fella
software error
5.9 years ago
sergi.picart
▴ 20
0
votes
0
replies
489
views
Error for getFireHoseData in RTCGAToolbox 2.16.1
software error
5.9 years ago
lingeng.lu
• 0
0
votes
2
replies
1.3k
views
keggLink Error: linking "genes" and "reaction"
software error
keggLink
R
updated 5.9 years ago by
shepherl
4.2k • written 5.9 years ago by
superdanny68
• 0
0
votes
1
reply
833
views
unable to install snpStats
software error
5.9 years ago
amirfartash
• 0
1
vote
1
reply
569
views
Issues with Somatic Signatures package
software error
somatic signatures
updated 5.9 years ago by
Martin Morgan
25k • written 5.9 years ago by
ahorn720
▴ 10
2
votes
7
replies
2.4k
views
DeSeq2 - Can't fetch any results: Error in .wrap_in_length_one_list_like_object(value, name, x)
deseq2
software error
updated 12 months ago by
Jack
• 0 • written 5.9 years ago by
David Eccles (gringer)
▴ 30
0
votes
2
replies
1.4k
views
Can't Load SingleCellExperiment Object
software error
SingleCellExperiment
updated 5.9 years ago by
Aaron Lun
★ 29k • written 5.9 years ago by
afichten
• 0
0
votes
1
reply
1.1k
views
recount: inconsistency between pheno table structure for gene and transcript datasets
software error
recount
updated 5.9 years ago by
Leonardo Collado Torres
★ 1.1k • written 5.9 years ago by
Jacques.van-Helden
• 0
0
votes
1
reply
1.1k
views
Error: cannot allocate vector of size 878.2 Mb
software error
nucleR
updated 5.9 years ago by
James W. MacDonald
68k • written 5.9 years ago by
anne.kannengiesser
• 0
0
votes
5
replies
2.3k
views
Rbowtie fails to compile using spack with "error: reference to Byte is ambiguous"
rbowtie
software error
updated 5.9 years ago by
Michael Stadler
▴ 350 • written 6.5 years ago by
Pariksheet Nanda
▴ 120
704 results • Page
3 of 15
Recent ...
Replies
Answer: Finding duplicated entries in GRangesList
by
Kevin Blighe
★ 4.0k
The duplicated and unique functions operate element-wise on GRangesList objects. This means that they apply the respective function to each…
Answer: DESeq2 on non-RNASeq counts data
by
Kevin Blighe
★ 4.0k
The use of DESeq2 for count data from artificial sequences is acceptable, as the program models counts via a negative binomial distribution…
Answer: After running samtools, the featureCounts command crashed.
by
Kevin Blighe
★ 4.0k
Hello Rui Tang, The buffer overflow error in featureCounts that you encountered is likely due to a compatibility issue between the Subre…
Answer: Problem with the TMB plot
by
Kevin Blighe
★ 4.0k
The issue that you describe with the tumor mutational burden (TMB) plots appearing linear and lacking consistent TMB values across samples …
Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
by
Kevin Blighe
★ 4.0k
There are alternative explanations for why these samples are so similar. The similarity could result from low biological variability in gen…
Votes
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Identifying differentially expressed genes in individual samples from a large co
Answer: Identifying differentially expressed genes in individual samples from a large co
Bioconductor Seminar Series - Dec 2: Deep-learning Gene Perturbation Effect Prediction
Awards
• All
Scholar
to
Gordon Smyth
53k
Popular Question
to
shepherl
4.2k
Supporter
to
fabio.marroni
• 0
Popular Question
to
Guido Hooiveld
★ 4.1k
Popular Question
to
James W. MacDonald
68k
Locations
• All
United States,
18 minutes ago
The city by the bay,
22 minutes ago
Germany,
1 hour ago
The Cave, 181 Longwood Avenue, Boston, USA,
1 hour ago
Germany,
2 hours ago
Traffic: 841 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6